Miyakogusa Predicted Gene

Lj0g3v0251549.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9HAH0_POPTR 360 38.5 52.8 (tr|B9HAH0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_867016 PE=4 SV=1
TAIR_pep AT5G38690.1 282 34.5 47.7 | Symbols: | Zinc-finger domain of monoamine-oxidase A repressor R1 protein | chr5:15479424-15482992 REVERSE LENGTH=572
Medicago Medtr6g017265.1 495 45.9 58.5 | zinc-finger of monoamine-oxidase A repressor R1 | HC | chr6:6917300-6911610 | 20130731
Soybean Glyma19g06110.1 531 49.1 59.5  
LJGI gnl|LJGI|TC64870 186 80.5 80.5 weakly similar to UniRef100_A7PAL1 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0251549.1 length: 577 aa.
IPR018500 DDT domain, subgroup
method AccNumber shortName E-value location
HMMSmart SM00571 domain 0.0064 265-330
IPR018501 DDT domain superfamily
ProfileScan PS50827 DDT 9.288 265-330
IPR018866 Zinc-finger domain of monoamine-oxidase A repressor R1
HMMPfam PF10497 zf-4CXXC_R1 7.9e-36 26-126
no_ID  
Coil coil coiled-coil NA 404-443
HMMPanther PTHR31169 FAMILY 6.7e-23 26-137
HMMPanther PTHR31169:SF0 SUBFAMILY 6.7e-23 26-137
Seg seg seg NA 166-185
318-326
374-383
408-435
Wolf-PSORT
Lj0g3v0251549.1	cyto 8, nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0251549.1