Miyakogusa Predicted Gene

Lj0g3v0251499.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T1R4_LOTJA 478 100.0 100.0 (tr|I3T1R4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G15215.2 200 42.7 58.1 | Symbols: | BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5238096-5239770 FORWARD LENGTH=258

Medicago Medtr3g110260.1 367 76.3 84.9 | DNA-binding protein, putative | HC | chr3:51452718-51446132 | 20130731

Soybean Glyma06g09200.1 361 76.4 86.8

LJGI gnl|LJGI|TC57234 1348 99.4 99.4 similar to UniRef100_A7P4B6 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0251499.1 length: 231 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR31979 FAMILY 1.3e-63 96-231

Wolf-PSORT

Lj0g3v0251499.1 chlo 6, nucl 4, mito 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0251499.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T1R4_LOTJA	478	100.0	100.0	(tr\|I3T1R4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G15215.2	200	42.7	58.1	\| Symbols: \| BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:5238096-5239770 FORWARD LENGTH=258
Medicago	Medtr3g110260.1	367	76.3	84.9	\| DNA-binding protein, putative \| HC \| chr3:51452718-51446132 \| 20130731
Soybean	Glyma06g09200.1	361	76.4	86.8
LJGI	gnl\|LJGI\|TC57234	1348	99.4	99.4	similar to UniRef100_A7P4B6 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)

no_ID
Lj0g3v0251499.1				length: 231 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR31979	FAMILY	1.3e-63	96-231