Miyakogusa Predicted Gene

Lj0g3v0251339.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7M3H5_SOYBN 500 72.5 78.9 (tr|K7M3H5) Uncharacterized protein OS=Glycine max PE=3 SV=1

TAIR_pep AT5G13490.2 436 63.8 75.4 | Symbols: AAC2 | ADP/ATP carrier 2 | chr5:4336034-4337379 FORWARD LENGTH=385

Medicago Medtr2g098070.1 459 70.0 74.8 | ADP/ATP carrier protein | HC | chr2:41906863-41902448 | 20130731

Soybean Glyma13g41540.1 500 72.5 78.9

LJGI gnl|LJGI|TC77573 1713 99.9 99.9 similar to UniRef100_P25083 Cluster: ADP,ATP carrier protein, mitochondrial precursor; n=1; Solanum tuberosum|Rep: ADP,ATP carrier protein, mitochondrial precursor - Solanum tuberosum (Potato), partial (61%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0251339.1 length: 336 aa.

IPR002067 Mitochondrial carrier protein

method AccNumber shortName E-value location

Biological Process GO:0055085 transmembrane transport

FPrintScan PR00926 MITOCARRIER 2.3e-63 91-104
104-118
154-174
206-224
256-274
300-322

IPR002113 Adenine nucleotide translocator 1

Molecular Function GO:0005215 transporter activity

Cellular Component GO:0005743 mitochondrial inner membrane

Biological Process GO:0006810 transport

Biological Process GO:0055085 transmembrane transport

FPrintScan PR00927 ADPTRNSLCASE 5e-38 88-100
132-153
165-177
191-204
296-312

IPR018108 Mitochondrial substrate/solute carrier

HMMPfam PF00153 Mito_carr 7.1e-21 87-183
193-283

ProfileScan PS50920 SOLCAR 8.697 86-179
191-283
291-336

IPR023395 Mitochondrial carrier domain

Gene3D G3DSA:1.50.40.10 no description 1.2e-64 88-336

superfamily SSF103506 Mitochondrial 4.2e-59 83-336

no_ID

HMMPanther PTHR24089 FAMILY 6.2e-143 55-336

HMMPanther PTHR24089:SF31 SUBFAMILY 6.2e-143 55-336

Seg seg seg NA 97-107
194-211

Wolf-PSORT

Lj0g3v0251339.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0251339.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7M3H5_SOYBN	500	72.5	78.9	(tr\|K7M3H5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep	AT5G13490.2	436	63.8	75.4	\| Symbols: AAC2 \| ADP/ATP carrier 2 \| chr5:4336034-4337379 FORWARD LENGTH=385
Medicago	Medtr2g098070.1	459	70.0	74.8	\| ADP/ATP carrier protein \| HC \| chr2:41906863-41902448 \| 20130731
Soybean	Glyma13g41540.1	500	72.5	78.9
LJGI	gnl\|LJGI\|TC77573	1713	99.9	99.9	similar to UniRef100_P25083 Cluster: ADP,ATP carrier protein, mitochondrial precursor; n=1; Solanum tuberosum\|Rep: ADP,ATP carrier protein, mitochondrial precursor - Solanum tuberosum (Potato), partial (61%)

IPR002067	Mitochondrial carrier protein
Lj0g3v0251339.1				length: 336 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0055085	transmembrane transport
FPrintScan	PR00926	MITOCARRIER	2.3e-63	91-104 104-118 154-174 206-224 256-274 300-322
IPR002113	Adenine nucleotide translocator 1
Molecular Function	GO:0005215	transporter activity
Cellular Component	GO:0005743	mitochondrial inner membrane
Biological Process	GO:0006810	transport
Biological Process	GO:0055085	transmembrane transport
FPrintScan	PR00927	ADPTRNSLCASE	5e-38	88-100 132-153 165-177 191-204 296-312
IPR018108	Mitochondrial substrate/solute carrier
HMMPfam	PF00153	Mito_carr	7.1e-21	87-183 193-283
ProfileScan	PS50920	SOLCAR	8.697	86-179 191-283 291-336
IPR023395	Mitochondrial carrier domain
Gene3D	G3DSA:1.50.40.10	no description	1.2e-64	88-336
superfamily	SSF103506	Mitochondrial	4.2e-59	83-336
no_ID
HMMPanther	PTHR24089	FAMILY	6.2e-143	55-336
HMMPanther	PTHR24089:SF31	SUBFAMILY	6.2e-143	55-336
Seg	seg	seg	NA	97-107 194-211