Miyakogusa Predicted Gene

Lj0g3v0251079.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NHY4_SOYBN 602 75.6 81.8 (tr|I1NHY4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G17740.1 412 57.4 68.7 | Symbols: | Peptidase S41 family protein | chr4:9867088-9869719 REVERSE LENGTH=515
Medicago Medtr1g073130.1 521 69.4 77.1 | carboxy-terminal processing peptidase-like protein | HC | chr1:32432703-32425912 | 20130731
Soybean Glyma20g34110.2 560 68.2 73.5  
LJGI gnl|LJGI|TC66265 1324 99.9 99.9 similar to UniRef100_A7NXM0 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0251079.1 length: 388 aa.
IPR001478 PDZ domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00595 PDZ 3.5e-09 225-298
HMMSmart SM00228 Domain 9e-15 224-301
ProfileScan PS50106 PDZ 12.184 212-300
superfamily SSF50156 PDZ 5.5e-21 194-328
IPR005151 Interphotoreceptor retinol-binding
Biological Process GO:0006508 proteolysis    
Molecular Function GO:0008236 serine-type peptidase activity    
HMMPfam PF03572 Peptidase_S41 1.9e-12 334-386
no_ID  
Gene3D G3DSA:2.30.42.10 no description 2.4e-20 229-309
Gene3D G3DSA:3.30.750.44 no description 1.5e-33 141-228
Gene3D G3DSA:3.90.226.10 no description 9.9e-17 310-387
HMMPanther PTHR22939 SERINE 1.9e-83 242-388
HMMPanther PTHR22939:SF49 SERINE 1.9e-83 242-388
Seg seg seg NA 120-142
superfamily SSF52096 ClpP/crotonase 1.8e-31 141-388
Wolf-PSORT
Lj0g3v0251079.1	chlo 8, cyto 2, vacu 2, nucl 1, E.R. 1, cyto_pero 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0251079.1