Miyakogusa Predicted Gene

Lj0g3v0251009.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5W3G7_PRUPE 674 66.3 80.5 (tr|M5W3G7) Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024338mg PE=4 SV=1
TAIR_pep AT5G66520.1 448 44.9 64.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:26551879-26553741 FORWARD LENGTH=620
Medicago Medtr3g052720.1 427 45.4 64.8 | organelle transcript processing protein, putative | HC | chr3:20868148-20864227 | 20130731
Soybean Glyma08g22830.1 456 46.4 66.6  
LJGI gnl|LJGI|FS336830 565 91.5 91.5 weakly similar to UniRef100_A7Q9C2 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0251009.1 length: 466 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.019 2-26
130-157
299-327
HMMPfam PF13041 PPR_2 2.7e-07 57-104
158-205
HMMPfam PF13812 PPR_3 0.039 230-256
HMMTigr TIGR00756 PPR: 3.8e-07 29-58
60-93
129-157
160-193
ProfileScan PS51375 PPR 8.681 57-91
26-56
1-25
158-192
127-157
92-126
229-259
193-228
295-329
no_ID  
HMMPanther PTHR24015 FAMILY 1.4e-226 2-466
HMMPanther PTHR24015:SF61 PGR3 1.4e-226 2-466
HMMPfam PF14432 DYW_deaminase 4.6e-18 343-456
Seg seg seg NA 173-184
Wolf-PSORT
Lj0g3v0251009.1	cyto 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0251009.1