Miyakogusa Predicted Gene

Lj0g3v0250919.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M1B858_SOLTU 237 49.6 60.9 (tr|M1B858) Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400015214 PE=4 SV=1
TAIR_pep AT1G54540.1 173 48.2 60.1 | Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:20367702-20368421 REVERSE LENGTH=239
Medicago Medtr1g077560.1 272 57.5 63.8 | late embryogenesis abundant hydroxyproline-rich glycoprotein | HC | chr1:34616049-34617274 | 20130731
Soybean Glyma20g35880.1 232 56.7 63.4  
LJGI gnl|LJGI|AV772956 236 98.4 98.4 weakly similar to UniRef100_A7PAX7 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0250919.1 length: 254 aa.
IPR004864 Late embryogenesis abundant protein, LEA-14
method AccNumber shortName E-value location
HMMPfam PF03168 LEA_2 1.3e-09 126-223
no_ID  
HMMPanther PTHR31852 FAMILY 1.6e-41 40-241
Seg seg seg NA 42-60
73-93
134-145
192-196
213-227
Putative transmembrane regions
  From To
TM segments
SOSUI		 70 92
Wolf-PSORT
Lj0g3v0250919.1	cyto 8, nucl 2, golg 2, mito 1, E.R. 1, cysk_nucl 1, nucl_plas 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0250919.1