Miyakogusa Predicted Gene
- Lj0g3v0250739.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L745_SOYBN |
871 |
79.3 |
88.4 |
(tr|K7L745) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G79460.1 |
536 |
54.1 |
71.5 |
| Symbols: GA2, KS, ATKS, ATKS1, KS1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr1:29890568-29894436 FORWARD LENGTH=785 |
| Medicago |
Medtr2g064295.1 |
865 |
78.7 |
89.2 |
| Ent-kaurene synthase | HC | chr2:27232963-27238876 | 20130731 |
| Soybean |
Glyma08g17470.1 |
870 |
79.3 |
88.4 |
|
| LJGI |
gnl|LJGI|GO038662 |
1324 |
99.4 |
99.4 |
weakly similar to UniRef100_Q9FRX5 Cluster: Ent-kaurene synthase; n=1; Cucumis sativus|Rep: Ent-kaurene synthase - Cucumis sativus (Cucumber), partial (19%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0250739.2 |
length: 524 aa. |
| IPR001906 |
Terpene synthase, N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| Molecular Function |
GO:0010333 |
terpene synthase activity |
|
|
| Molecular Function |
GO:0016829 |
lyase activity |
|
|
| Gene3D |
G3DSA:1.50.30.10 |
no description |
9.1e-51 |
1-191 |
| HMMPfam |
PF01397 |
Terpene_synth |
1.3e-32 |
1-138 |
| IPR005630 |
Terpene synthase, metal-binding domain |
| Molecular Function |
GO:0000287 |
magnesium ion binding |
|
|
| Molecular Function |
GO:0010333 |
terpene synthase activity |
|
|
| Molecular Function |
GO:0016829 |
lyase activity |
|
|
| HMMPfam |
PF03936 |
Terpene_synth_C |
7.3e-70 |
182-448 |
| IPR008930 |
Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid |
| superfamily |
SSF48239 |
Terpenoid |
2.1e-43 |
1-164 |
| IPR008949 |
Terpenoid synthase |
| Gene3D |
G3DSA:1.10.600.10 |
no description |
6.4e-90 |
192-502 |
| superfamily |
SSF48576 |
Terpenoid |
5.6e-81 |
177-503 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
427-455 |
| HMMPanther |
PTHR31739 |
FAMILY |
3.6e-193 |
1-516 |
| HMMPanther |
PTHR31739:SF0 |
SUBFAMILY |
3.6e-193 |
1-516 |
| Seg |
seg |
seg |
NA |
252-261 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
352 |
374 |
- Wolf-PSORT
Lj0g3v0250739.2 chlo 4, nucl 3.5, cysk_nucl 2.5, E.R. 2, cyto 1, mito 1, plas 1, vacu 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0250739.2 |
|