| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7JZJ8_MEDTR | 226 | 57.7 | 69.3 | (tr|G7JZJ8) Chromodomain helicase-DNA-binding protein OS=Medicago truncatula GN=MTR_5g071340 PE=4 SV=1 |
| TAIR_pep | AT5G58610.1 | 131 | 42.7 | 57.8 | | Symbols: | PHD finger transcription factor, putative | chr5:23686771-23691053 REVERSE LENGTH=1065 |
| Medicago | Medtr5g071340.1 | 226 | 57.7 | 69.3 | | PHD zinc finger protein | HC | chr5:30255974-30261989 | 20130731 |
| Soybean | Glyma11g27510.1 | 175 | 49.2 | 61.9 | |
| LJGI | --No_Hits-- |
| Lj0g3v0250639.1 | length: 185 aa. | |||
| IPR001965 | Zinc finger, PHD-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00249 | PHD | 17 | 29-70 71-123 |
| IPR011011 | Zinc finger, FYVE/PHD-type | |||
| superfamily | SSF57903 | FYVE/PHD | 0.012 | 12-70 71-141 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 5.4e-18 | 12-76 |
| IPR019787 | Zinc finger, PHD-finger | |||
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00628 | PHD | 2.6e-11 | 29-71 |
| ProfileScan | PS50016 | ZF_PHD_2 | 10.531 | 27-72 |
| no_ID | ||||
| HMMPanther | PTHR24098 | FAMILY | 5.7e-14 | 25-180 |
| HMMPanther | PTHR24098:SF1 | SUBFAMILY | 5.7e-14 | 25-180 |
| Seg | seg | seg | NA | 145-160 |
Lj0g3v0250639.1 nucl 7, cyto 5, extr 1, vacu 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0250639.1 |