Miyakogusa Predicted Gene

Lj0g3v0249849.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JVG7_SOYBN 310 83.0 90.9 (tr|I1JVG7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G78070.1 297 81.9 91.0 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:29355219-29358368 FORWARD LENGTH=449
Medicago Medtr3g074070.1 301 81.8 89.8 | transducin/WD40 repeat protein | HC | chr3:33432745-33438182 | 20130731
Soybean Glyma04g11330.1 310 83.0 90.9  
LJGI gnl|LJGI|TC70034 985 99.8 99.8 similar to UniRef100_Q94JT6 Cluster: At1g78070/F28K19_28; n=1; Arabidopsis thaliana|Rep: At1g78070/F28K19_28 - Arabidopsis thaliana (Mouse-ear cress), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0249849.1 length: 178 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 2.3e-07 40-78
HMMSmart SM00320 WD40 6.7 39-78
82-121
ProfileScan PS50082 WD_REPEATS_2 13.884 46-87
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 9.4e-29 13-158
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 15.083 46-130
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 65-79
no_ID  
HMMPanther PTHR22847 WD40 1.1e-101 13-159
HMMPanther PTHR22847:SF100PREDICTED PROTEIN 1.1e-101 13-159
superfamily SSF50960 TolB, 1e-26 14-158
Wolf-PSORT
Lj0g3v0249849.1	cyto 8, mito 2, nucl 1.5, cysk_nucl 1.5, extr 1, pero 1, chlo_mito 1, cyto_mito 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0249849.1