Miyakogusa Predicted Gene

Lj0g3v0249089.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K8W4_SOYBN 2037 90.7 94.2 (tr|I1K8W4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G32410.1 1875 83.1 90.0 | Symbols: CESA1, RSW1, AtCESA1 | cellulose synthase 1 | chr4:15641009-15646388 REVERSE LENGTH=1081
Medicago Medtr3g107520.1 1966 87.5 92.3 | cellulose synthase-like protein | HC | chr3:49595243-49588493 | 20130731
Soybean Glyma06g07320.1 2037 90.7 94.2  
LJGI gnl|LJGI|TC73929 1850 99.9 99.9 homologue to UniRef100_Q6YBV2 Cluster: Cellulose synthase; n=1; Populus tremuloides|Rep: Cellulose synthase - Populus tremuloides (Quaking aspen), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0249089.1 length: 1083 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.052 40-86
IPR005150 Cellulose synthase
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016760 cellulose synthase (UDP-forming) activity    
Biological Process GO:0030244 cellulose biosynthetic process    
HMMPfam PF03552 Cellulose_synt 0 358-1074
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.8e-35 25-114
no_ID  
Coil coil coiled-coil NA 456-477
HMMPanther PTHR13301 X-BOX 0 16-1083
HMMPanther PTHR13301:SF21 CELLULOSE 0 16-1083
Seg seg seg NA 98-109
279-289
668-679
superfamily SSF53448 Nucleotide-diphospho-sugar 0.0032 357-658
783-908
superfamily SSF57850 RING/U-box 9.4e-42 22-117
Putative transmembrane regions
  From To
TM segments
SOSUI		 859 881
890 912
982 1004
1015 1037
1045 1065
Wolf-PSORT
Lj0g3v0249089.1	plas 5, nucl 4, cyto 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0249089.1