Miyakogusa Predicted Gene
- Lj0g3v0248799.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5XT01_PRUPE |
493 |
49.2 |
72.1 |
(tr|M5XT01) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026277mg PE=4 SV=1 |
| TAIR_pep |
AT4G38180.1 |
314 |
37.2 |
57.2 |
| Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788 |
| Medicago |
Medtr6g051425.1 |
109 |
47.6 |
70.9 |
| FAR1 DNA-binding domain protein | HC | chr6:17965556-17964534 | 20130731 |
| Soybean |
Glyma10g38320.1 |
482 |
46.0 |
71.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0248799.1 |
length: 489 aa. |
| IPR006564 |
Zinc finger, PMZ-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMSmart |
SM00575 |
plant |
2.8e-06 |
349-376 |
| IPR007527 |
Zinc finger, SWIM-type |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMPfam |
PF04434 |
SWIM |
9.9e-06 |
350-374 |
| ProfileScan |
PS50966 |
ZF_SWIM |
9.953 |
338-374 |
| IPR018289 |
MULE transposase domain |
| HMMPfam |
PF10551 |
MULE |
4e-28 |
63-153 |
| no_ID |
|
| HMMPanther |
PTHR31669 |
FAMILY |
2.4e-136 |
1-471 |
| HMMPanther |
PTHR31669:SF0 |
SUBFAMILY |
2.4e-136 |
1-471 |
- Wolf-PSORT
Lj0g3v0248799.1 cyto 9, nucl 3, mito 1, vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0248799.1 |
|