Miyakogusa Predicted Gene
- Lj0g3v0247139.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SJB4_LOTJA |
289 |
91.0 |
91.0 |
(tr|I3SJB4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G68660.1 |
221 |
67.9 |
78.6 |
| Symbols: | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein | chr1:25778058-25779083 REVERSE LENGTH=159 |
| Medicago |
Medtr5g054770.1 |
263 |
80.8 |
85.9 |
| ATP-dependent Clp protease adaptor protein ClpS | HC | chr5:22566023-22570033 | 20130731 |
| Soybean |
Glyma01g21500.1 |
256 |
81.4 |
85.9 |
|
| LJGI |
gnl|LJGI|TC60255 |
934 |
100.0 |
100.0 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0247139.1 |
length: 156 aa. |
| IPR003769 |
Adaptor protein ClpS, core |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0030163 |
protein catabolic process |
|
|
| HMMPfam |
PF02617 |
ClpS |
4.5e-22 |
74-146 |
| IPR014719 |
Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like |
| Gene3D |
G3DSA:3.30.1390.10 |
no description |
5.2e-28 |
56-152 |
| superfamily |
SSF54736 |
ClpS-like |
7.2e-22 |
71-151 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
38-51 |
- Wolf-PSORT
Lj0g3v0247139.1 cyto 8, chlo 3, nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0247139.1 |
|