Miyakogusa Predicted Gene

Lj0g3v0247049.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q7X9F5_9FABA 393 60.5 69.1 (tr|Q7X9F5) Class Ia chitinase OS=Galega orientalis PE=2 SV=1
TAIR_pep AT3G12500.1 320 52.2 62.5 | Symbols: ATHCHIB, PR3, PR-3, CHI-B, B-CHI, HCHIB | basic chitinase | chr3:3962501-3963984 REVERSE LENGTH=335
Medicago Medtr3g118390.1 381 59.9 67.1 | Chitinase (Class I) / Hevein | HC | chr3:55413457-55415176 | 20130731
Soybean Glyma02g04820.1 315 50.2 61.8  
LJGI gnl|LJGI|TC66900 549 83.8 83.8 similar to UniRef100_P94084 Cluster: Class I chitinase; n=1; Medicago sativa|Rep: Class I chitinase - Medicago sativa (Alfalfa), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0247049.1 length: 322 aa.
IPR000726 Glycoside hydrolase, family 19, catalytic
method AccNumber shortName E-value location
Molecular Function GO:0004568 chitinase activity    
Biological Process GO:0006032 chitin catabolic process    
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMPfam PF00182 Glyco_hydro_19 1.3e-110 83-305
PatternScan PS00773 CHITINASE_19_1 NA 101-123
PatternScan PS00774 CHITINASE_19_2 NA 226-236
IPR001002 Chitin-binding, type 1
Molecular Function GO:0008061 chitin binding    
BlastProDom PD000609 Q41539_WHEAT_Q41539; 0.0003 23-61
FPrintScan PR00451 CHITINBINDNG 2e-05 32-40
40-47
47-54
Gene3D G3DSA:3.30.60.10 no description 1.6e-13 23-62
HMMPfam PF00187 Chitin_bind_1 2e-15 22-61
HMMSmart SM00270 Chitin 1.2e-14 24-61
ProfileScan PS50941 CHIT_BIND_I_2 10.766 22-63
superfamily SSF57016 Plant 1.3e-11 23-65
IPR016283 Glycoside hydrolase, family 19
Molecular Function GO:0004568 chitinase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPIR PIRSF001060 Endochitinase 5.2e-176 1-305
IPR018371 Chitin-binding, type 1, conserved site
Molecular Function GO:0008061 chitin binding    
PatternScan PS00026 CHIT_BIND_I_1 NA 34-53
IPR023346 Lysozyme-like domain
superfamily SSF53955 Lysozyme-like 4.7e-103 79-313
no_ID  
Gene3D G3DSA:1.10.530.10 no description 3.6e-59 220-305
Gene3D G3DSA:3.30.20.10 no description 1.1e-27 167-219
HMMPanther PTHR22595 CHITINASE-RELATED 4.3e-178 1-321
HMMPanther PTHR22595:SF11 CLASS 4.3e-178 1-321
Seg seg seg NA 29-40
62-81
211-226
261-270
Putative transmembrane regions
  From To
TM segments
SOSUI		 4 26
Wolf-PSORT
Lj0g3v0247049.1	extr 11, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0247049.1