Miyakogusa Predicted Gene

Lj0g3v0245739.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K3G7_MEDTR 316 86.2 93.1 (tr|G7K3G7) DNA polymerase OS=Medicago truncatula GN=MTR_5g092100 PE=3 SV=1
TAIR_pep AT3G20540.2 266 75.3 85.6 | Symbols: POLGAMMA1 | polymerase gamma 1 | chr3:7168261-7173357 FORWARD LENGTH=1049
Medicago Medtr5g092100.1 316 86.2 93.1 | PolI-like B DNA polymerase | HC | chr5:40221218-40213069 | 20130731
Soybean Glyma02g45910.1 314 86.8 92.5  
LJGI gnl|LJGI|TC70834 339 98.4 98.4 similar to UniRef100_A7P230 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0245739.1 length: 174 aa.
IPR001098 DNA-directed DNA polymerase, family A, palm domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
HMMPfam PF00476 DNA_pol_A 3.4e-27 2-171
HMMSmart SM00482 DNA 5.1e-07 1-134
IPR002298 DNA polymerase A
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
FPrintScan PR00868 DNAPOLI 1.2e-11 55-66
87-103
117-130
no_ID  
Gene3D G3DSA:1.10.150.20 no description 3.1e-20 2-92
Gene3D G3DSA:3.30.70.370 no description 9.6e-19 93-171
HMMPanther PTHR10133 DNA 9.1e-69 1-172
HMMPanther PTHR10133:SF20 DNA 9.1e-69 1-172
superfamily SSF56672 DNA/RNA 5.1e-43 1-174
Wolf-PSORT
Lj0g3v0245739.1	cyto 7, chlo 4, nucl 1.5, cysk_nucl 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0245739.1