Miyakogusa Predicted Gene
- Lj0g3v0244969.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S4C5_MEDTR |
124 |
67.5 |
83.1 |
(tr|I3S4C5) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT1G04280.1 |
84.7 |
52.7 |
73.0 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:1143643-1146541 REVERSE LENGTH=534 |
| Medicago |
Medtr1g475250.3 |
124 |
67.5 |
83.1 |
| P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr1:33283176-33269790 | 20130731 |
| Soybean |
Glyma20g34750.1 |
111 |
63.1 |
79.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0244969.1 |
length: 118 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31153 |
UNCHARACTERIZED |
2e-25 |
1-118 |
| Seg |
seg |
seg |
NA |
16-33 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
12 |
33 |
- Wolf-PSORT
Lj0g3v0244969.1 plas 3, extr 3, E.R. 3, E.R._plas 3, chlo 2, cyto 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0244969.1 |
Not targeted |
-43.925 |
0 |
-8.187 |
62.23% |
-35.738
|