Miyakogusa Predicted Gene

Lj0g3v0244239.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SP67_LOTJA 425 100.0 100.0 (tr|I3SP67) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G64090.1 287 66.5 79.1 | Symbols: RTNLB3 | Reticulan like protein B3 | chr1:23789395-23790669 FORWARD LENGTH=255
Medicago Medtr8g028450.1 364 82.6 89.7 | seed maturation protein | HC | chr8:10790852-10788310 | 20130731
Soybean Glyma07g06830.1 337 78.2 86.7  
LJGI gnl|LJGI|TC77366 1526 99.9 99.9 similar to UniRef100_A7QNG2 Cluster: Chromosome chr2 scaffold_132, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_132, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0244239.1 length: 258 aa.
IPR003388 Reticulon
method AccNumber shortName E-value location
Cellular Component GO:0005783 endoplasmic reticulum    
HMMPanther PTHR10994 RETICULON 1e-94 17-244
HMMPfam PF02453 Reticulon 5.4e-54 70-231
ProfileScan PS50845 RETICULON 43.430 69-258
no_ID  
HMMPanther PTHR10994:SF27 RETICULON-RELATED 1e-94 17-244
Seg seg seg NA 2-18
24-45
Putative transmembrane regions
  From To
TM segments
SOSUI		 90 112
180 202
Wolf-PSORT
Lj0g3v0244239.1	vacu 6, E.R. 4, plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0244239.1