Miyakogusa Predicted Gene

Lj0g3v0243989.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7K8Z3_SOYBN 196 70.8 76.6 (tr|K7K8Z3) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G56720.2 100 64.5 67.7 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. | chr3:21011354-21013264 FORWARD LENGTH=387

Medicago Medtr1g050510.1 182 69.5 74.7 | hypothetical protein | HC | chr1:19684855-19688731 | 20130731

Soybean Glyma10g19040.1 168 68.8 75.3

LJGI gnl|LJGI|TC77586 886 99.4 99.4 similar to UniRef100_A7QJH0 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0243989.1 length: 167 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 125-135
138-150

Wolf-PSORT

Lj0g3v0243989.1 chlo 4, mito 4, chlo_mito 4, nucl_plas 2, nucl 1.5, plas 1.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0243989.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7K8Z3_SOYBN	196	70.8	76.6	(tr\|K7K8Z3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G56720.2	100	64.5	67.7	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. \| chr3:21011354-21013264 FORWARD LENGTH=387
Medicago	Medtr1g050510.1	182	69.5	74.7	\| hypothetical protein \| HC \| chr1:19684855-19688731 \| 20130731
Soybean	Glyma10g19040.1	168	68.8	75.3
LJGI	gnl\|LJGI\|TC77586	886	99.4	99.4	similar to UniRef100_A7QJH0 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)

no_ID
Lj0g3v0243989.1				length: 167 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	125-135 138-150