Miyakogusa Predicted Gene

Lj0g3v0243669.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K5G1_SOYBN 1008 93.9 97.0 (tr|I1K5G1) T-complex protein 1 subunit delta OS=Glycine max PE=3 SV=1
TAIR_pep AT3G18190.1 963 89.2 95.3 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr3:6232226-6233836 FORWARD LENGTH=536
Medicago Medtr3g109925.1 1012 94.1 97.5 | TCP-1/cpn60 chaperonin family protein | HC | chr3:50700677-50702708 | 20130731
Soybean Glyma05g34190.1 1008 93.9 97.0  
LJGI gnl|LJGI|TC78480 2974 98.7 98.7 homologue to UniRef100_A7VJA5 Cluster: Group II-chaperonin delta-subunit; n=1; Glycine max|Rep: Group II-chaperonin delta-subunit - Glycine max (Soybean), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0243669.1 length: 529 aa.
IPR002194 Chaperonin TCP-1, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
PatternScan PS00750 TCP1_1 NA 38-50
PatternScan PS00995 TCP1_3 NA 87-95
IPR002423 Chaperonin Cpn60/TCP-1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0044267 cellular protein metabolic process    
HMMPanther PTHR11353 CHAPERONIN 0 1-529
HMMPfam PF00118 Cpn60_TCP1 2.2e-146 33-527
superfamily SSF48592 GroEL 1.2e-83 12-528
IPR012717 T-complex protein 1, delta subunit
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPanther PTHR11353:SF26 CHAPERONIN 0 1-529
HMMTigr TIGR02342 chap_CCT_delta: 8.2e-262 15-528
IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1)
FPrintScan PR00304 TCOMPLEXTCP1 3.3e-32 35-51
57-75
87-106
377-399
411-423
IPR027409 GroEL-like apical domain
Gene3D G3DSA:3.50.7.10 no description 3.6e-49 211-377
superfamily SSF52029 GroEL 2.8e-51 213-370
IPR027410 TCP-1-like chaperonin intermediate domain
Gene3D G3DSA:3.30.260.10 no description 1.8e-33 378-406
IPR027413 GroEL-like equatorial domain
Gene3D G3DSA:1.10.560.10 no description 1.4e-84 407-527
no_ID  
Seg seg seg NA 105-113
superfamily SSF54849 GroEL-intermediate 1.4e-31 147-410
Wolf-PSORT
Lj0g3v0243669.1	chlo 3, E.R. 3, plas 2, vacu 2, chlo_mito 2, nucl 1.5, cyto_nucl 1.5, mito_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0243669.1