Miyakogusa Predicted Gene
- Lj0g3v0243579.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K1A1_SOYBN |
182 |
97.8 |
98.9 |
(tr|I1K1A1) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G03280.1 |
140 |
73.0 |
85.4 |
| Symbols: | Transcription factor TFIIE, alpha subunit | chr1:803635-806758 FORWARD LENGTH=479 |
| Medicago |
Medtr8g077000.1 |
153 |
83.1 |
92.1 |
| transcription initiation factor IIE, putative | HC | chr8:32692655-32682881 | 20130731 |
| Soybean |
Glyma06g23400.1 |
170 |
91.0 |
97.8 |
|
| LJGI |
gnl|LJGI|TC80033 |
287 |
100.0 |
100.0 |
weakly similar to UniRef100_A9S7R4 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (25%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0243579.1 |
length: 89 aa. |
| IPR017919 |
Transcription factor TFE/TFIIEalpha HTH domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0043565 |
sequence-specific DNA binding |
|
|
| ProfileScan |
PS51344 |
HTH_TFE_IIE |
27.139 |
5-89 |
| IPR024550 |
TFIIEalpha/SarR/Rpc3 HTH domain |
| HMMPfam |
PF02002 |
TFIIE_alpha |
2.1e-07 |
39-87 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
58-79 |
| HMMPanther |
PTHR13097 |
TRANSCRIPTION |
7.2e-22 |
3-88 |
- Wolf-PSORT
Lj0g3v0243579.1 cyto 10, nucl 2, mito 1, golg 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0243579.1 |
|