Miyakogusa Predicted Gene

Lj0g3v0243119.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6GXK2_VITVI 187 80.5 88.1 (tr|F6GXK2) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00030 PE=4 SV=1
TAIR_pep AT4G26000.1 163 69.8 85.3 | Symbols: PEP | RNA-binding KH domain-containing protein | chr4:13197280-13199539 FORWARD LENGTH=495
Medicago Medtr4g127380.1 179 75.9 87.9 | poly(rC)-binding-like protein | HC | chr4:52864244-52858917 | 20130731
Soybean Glyma13g00510.1 187 81.7 92.2  
LJGI gnl|LJGI|TC72222 666 100.0 100.0 similar to UniRef100_A7QUD9 Cluster: Chromosome chr11 scaffold_177, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_177, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0243119.1 length: 112 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 2.9e-11 24-99
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 1.4e-11 28-93
ProfileScan PS50084 KH_TYPE_1 14.026 25-94
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 5.2e-17 26-100
HMMPanther PTHR10288 KH 8e-27 2-112
HMMPanther PTHR10288:SF53 KH 8e-27 2-112
superfamily SSF54791 Eukaryotic 9.9e-13 13-106
Wolf-PSORT
Lj0g3v0243119.1	cyto 6, mito 5, chlo 1, pero 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0243119.1