| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7JS79_MEDTR | 543 | 93.9 | 96.8 | (tr|G7JS79) Polygalacturonase-like protein OS=Medicago truncatula GN=MTR_4g124980 PE=4 SV=1 |
| TAIR_pep | AT1G19170.1 | 470 | 79.0 | 89.1 | | Symbols: | Pectin lyase-like superfamily protein | chr1:6616777-6618875 FORWARD LENGTH=506 |
| Medicago | Medtr4g124980.1 | 543 | 93.9 | 96.8 | | pectin lyase superfamily protein | HC | chr4:51842179-51838098 | 20130731 |
| Soybean | Glyma17g05550.1 | 532 | 91.3 | 96.0 | |
| LJGI | gnl|LJGI|TC60630 | 979 | 100.0 | 100.0 | similar to UniRef100_A7PDT4 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%) |
| Lj0g3v0243059.1 | length: 277 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 6.2e-38 | 6-229 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 8.1e+03 | 26-53 54-75 88-110 116-137 145-166 179-201 206-227 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 1.4e-71 | 1-250 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 1.8e-77 | 2-238 |
| no_ID | ||||
| HMMPanther | PTHR31339 | FAMILY | 1.6e-113 | 1-275 |
| HMMPanther | PTHR31339:SF0 | SUBFAMILY | 1.6e-113 | 1-275 |
Lj0g3v0243059.1 cyto 8, plas 2, extr 2, chlo 1, cysk 1, nucl_plas 1, golg_plas 1, E.R._plas 1, mito_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0243059.1 |