Miyakogusa Predicted Gene
- Lj0g3v0242399.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M9Q7_SOYBN |
501 |
77.7 |
85.0 |
(tr|I1M9Q7) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT3G49600.1 |
305 |
50.5 |
65.4 |
| Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067 |
| Medicago |
Medtr1g010040.1 |
493 |
74.8 |
82.5 |
| ubiquitin carboxyl-terminal hydrolase | HC | chr1:1703938-1713526 | 20130731 |
| Soybean |
Glyma14g17070.1 |
471 |
73.9 |
80.9 |
|
| LJGI |
gnl|LJGI|DC593655 |
1015 |
98.0 |
98.0 |
similar to UniRef100_Q9SCJ9 Cluster: Ubiquitin carboxyl-terminal hydrolase 26; n=1; Arabidopsis thaliana|Rep: Ubiquitin carboxyl-terminal hydrolase 26 - Arabidopsis thaliana (Mouse-ear cress), partial (4%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0242399.1 |
length: 314 aa. |
| IPR001394 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004221 |
ubiquitin thiolesterase activity |
|
|
| Biological Process |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
|
|
| HMMPfam |
PF00443 |
UCH |
1.4e-13 |
11-118 |
| ProfileScan |
PS50235 |
UCH_2_3 |
11.025 |
1-122 |
| IPR006615 |
Peptidase C19, ubiquitin-specific peptidase, DUSP domain |
| Molecular Function |
GO:0004221 |
ubiquitin thiolesterase activity |
|
|
| HMMSmart |
SM00695 |
Domain |
6.6e-11 |
203-279 |
| ProfileScan |
PS51283 |
DUSP |
11.497 |
185-277 |
| IPR018200 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site |
| Molecular Function |
GO:0004221 |
ubiquitin thiolesterase activity |
|
|
| Biological Process |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
|
|
| PatternScan |
PS00973 |
UCH_2_2 |
NA |
15-33 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.2230.10 |
no description |
9.5e-10 |
183-272 |
| HMMPanther |
PTHR24006 |
FAMILY |
1.6e-74 |
1-265 |
| HMMPanther |
PTHR24006:SF86 |
SUBFAMILY |
1.6e-74 |
1-265 |
| Seg |
seg |
seg |
NA |
100-111 |
| superfamily |
SSF143791 |
DUSP-like |
1e-14 |
179-278 |
| superfamily |
SSF54001 |
Cysteine |
2.2e-16 |
13-118 |
- Wolf-PSORT
Lj0g3v0242399.1 nucl 10, cyto 2, chlo 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0242399.1 |
|