Miyakogusa Predicted Gene
- Lj0g3v0242219.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JFP8_SOYBN |
474 |
76.5 |
82.3 |
(tr|I1JFP8) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT2G37010.1 |
339 |
59.2 |
70.3 |
| Symbols: ATNAP12, NAP12 | non-intrinsic ABC protein 12 | chr2:15541720-15546159 FORWARD LENGTH=1082 |
| Medicago |
Medtr1g094660.1 |
416 |
68.5 |
78.1 |
| white-brown-complex ABC transporter family protein, putative | HC | chr1:42549405-42557509 | 20130731 |
| Soybean |
Glyma02g21570.1 |
452 |
74.3 |
80.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0242219.1 |
length: 307 aa. |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF52540 |
P-loop |
1.7e-20 |
182-307 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
2e-21 |
176-307 |
| HMMPanther |
PTHR19241 |
ATP-BINDING |
3.6e-100 |
2-307 |
| HMMPanther |
PTHR19241:SF19 |
ATP-BINDING |
3.6e-100 |
2-307 |
| Seg |
seg |
seg |
NA |
70-83 |
- Wolf-PSORT
Lj0g3v0242219.1 mito 8.5, chlo_mito 6, chlo 2.5, nucl 1.5, cyto_nucl 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0242219.1 |
|