| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7N3K8_SOYBN | 554 | 78.8 | 86.4 | (tr|K7N3K8) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT5G62190.1 | 464 | 75.1 | 85.2 | | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | chr5:24980542-24983879 REVERSE LENGTH=671 |
| Medicago | Medtr1g102410.1 | 519 | 82.1 | 87.8 | | DEAD-box ATP-dependent RNA helicase | HC | chr1:46249372-46245255 | 20130731 |
| Soybean | Glyma20g29060.1 | 554 | 78.8 | 86.4 | |
| LJGI | gnl|LJGI|FS335918 | 198 | 87.3 | 87.3 | similar to UniRef100_A7QGV9 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%) |
| Lj0g3v0241739.1 | length: 343 aa. | |||
| IPR000629 | RNA helicase, ATP-dependent, DEAD-box, conserved site | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| PatternScan | PS00039 | DEAD_ATP_HELICASE | NA | 210-218 |
| IPR001650 | Helicase, C-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| ProfileScan | PS51194 | HELICASE_CTER | 6.839 | 295-343 |
| IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| HMMPfam | PF00270 | DEAD | 1.1e-44 | 77-254 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
| HMMSmart | SM00487 | DEAD-like | 2.8e-48 | 72-284 |
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 28.554 | 84-266 |
| IPR014014 | RNA helicase, DEAD-box type, Q motif | |||
| ProfileScan | PS51195 | Q_MOTIF | 7.211 | 53-81 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 1.1e-10 | 33-261 243-343 |
| no_ID | ||||
| Gene3D | G3DSA:3.40.50.300 | no description | 1.8e-07 | 47-268 270-343 |
| HMMPanther | PTHR24031 | FAMILY | 4e-164 | 4-343 |
| HMMPanther | PTHR24031:SF107HELICASE | CONSERVED | 4e-164 | 4-343 |
| Seg | seg | seg | NA | 23-45 |
Lj0g3v0241739.1 nucl 8, cysk 3, cyto 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0241739.1 | Not targeted | -33.613 | -0.284 | -0.233 | 38.50% | -33.096 |