Miyakogusa Predicted Gene
- Lj0g3v0241729.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7ID38_MEDTR |
794 |
83.2 |
90.5 |
(tr|G7ID38) Alpha-L-fucosidase OS=Medicago truncatula GN=MTR_1g102230 PE=4 SV=1 |
| TAIR_pep |
AT2G28100.1 |
464 |
51.5 |
66.6 |
| Symbols: ATFUC1, FUC1 | alpha-L-fucosidase 1 | chr2:11974803-11976489 FORWARD LENGTH=506 |
| Medicago |
Medtr1g102230.1 |
794 |
83.2 |
90.5 |
| alpha-L-fucosidase-like protein | HC | chr1:46172132-46169222 | 20130731 |
| Soybean |
Glyma10g38670.1 |
793 |
79.7 |
87.6 |
|
| LJGI |
gnl|LJGI|TC81394 |
1263 |
99.8 |
99.8 |
similar to UniRef100_A7QGW6 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0241729.1 |
length: 481 aa. |
| IPR000933 |
Glycoside hydrolase, family 29 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004560 |
alpha-L-fucosidase activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPanther |
PTHR10030 |
ALPHA-L-FUCOSIDASE |
1.2e-128 |
6-481 |
| HMMPfam |
PF01120 |
Alpha_L_fucos |
1.4e-34 |
66-340 |
| HMMSmart |
SM00812 |
Alpha-L-fucosidase |
3e-12 |
38-352 |
| IPR008979 |
Galactose-binding domain-like |
| Gene3D |
G3DSA:2.60.120.260 |
no description |
0.00062 |
351-469 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
6.9e-94 |
36-346 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
3e-86 |
31-348 |
| no_ID |
|
| HMMPanther |
PTHR10030:SF0 |
ALPHA-L-FUCOSIDASE |
1.2e-128 |
6-481 |
| Seg |
seg |
seg |
NA |
31-42 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
4 |
26 |
- Wolf-PSORT
Lj0g3v0241729.1 chlo 8, nucl 2, cyto 1, mito 1, vacu 1, E.R. 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0241729.1 |
|