Miyakogusa Predicted Gene

Lj0g3v0241719.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LL62_SOYBN 667 83.2 89.9 (tr|K7LL62) 3-ketoacyl-CoA synthase OS=Glycine max PE=3 SV=1

TAIR_pep AT1G68530.1 393 48.9 70.5 | Symbols: CUT1, POP1, CER6, G2, KCS6 | 3-ketoacyl-CoA synthase 6 | chr1:25712881-25714733 REVERSE LENGTH=497

Medicago Medtr1g102290.1 630 78.4 89.2 | 3-ketoacyl-CoA synthase-like protein | HC | chr1:46187775-46189238 | 20130731

Soybean Glyma10g38660.1 667 83.2 89.9

LJGI gnl|LJGI|DC597970 749 100.0 100.0 weakly similar to UniRef100_A7QGR7 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0241719.1 length: 389 aa.

IPR013601 FAE1/Type III polyketide synthase-like protein

method AccNumber shortName E-value location

Biological Process GO:0006633 fatty acid biosynthetic process

Cellular Component GO:0016020 membrane

Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

HMMPfam PF08392 FAE1_CUT1_RppA 4.2e-110 20-306

IPR016038 Thiolase-like, subgroup

Molecular Function GO:0003824 catalytic activity

Biological Process GO:0008152 metabolic process

Gene3D G3DSA:3.40.47.10 no description 9.9e-28 22-225
236-385

IPR016039 Thiolase-like

Molecular Function GO:0003824 catalytic activity

Biological Process GO:0008152 metabolic process

superfamily SSF53901 Thiolase-like 5.8e-15 24-226
211-386

no_ID

HMMPanther PTHR31561 FAMILY 1.2e-184 1-385

Seg seg seg NA 4-16

Wolf-PSORT

Lj0g3v0241719.1 chlo 3, vacu 3, extr 2, E.R. 2, chlo_mito 2, nucl 1, cyto 1, mito 1, plas 1, cyto_nucl 1, nucl_plas 1, mito_plas 1, cyto_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0241719.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LL62_SOYBN	667	83.2	89.9	(tr\|K7LL62) 3-ketoacyl-CoA synthase OS=Glycine max PE=3 SV=1
TAIR_pep	AT1G68530.1	393	48.9	70.5	\| Symbols: CUT1, POP1, CER6, G2, KCS6 \| 3-ketoacyl-CoA synthase 6 \| chr1:25712881-25714733 REVERSE LENGTH=497
Medicago	Medtr1g102290.1	630	78.4	89.2	\| 3-ketoacyl-CoA synthase-like protein \| HC \| chr1:46187775-46189238 \| 20130731
Soybean	Glyma10g38660.1	667	83.2	89.9
LJGI	gnl\|LJGI\|DC597970	749	100.0	100.0	weakly similar to UniRef100_A7QGR7 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)

IPR013601	FAE1/Type III polyketide synthase-like protein
Lj0g3v0241719.1				length: 389 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0006633	fatty acid biosynthetic process
Cellular Component	GO:0016020	membrane
Molecular Function	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups
HMMPfam	PF08392	FAE1_CUT1_RppA	4.2e-110	20-306
IPR016038	Thiolase-like, subgroup
Molecular Function	GO:0003824	catalytic activity
Biological Process	GO:0008152	metabolic process
Gene3D	G3DSA:3.40.47.10	no description	9.9e-28	22-225 236-385
IPR016039	Thiolase-like
Molecular Function	GO:0003824	catalytic activity
Biological Process	GO:0008152	metabolic process
superfamily	SSF53901	Thiolase-like	5.8e-15	24-226 211-386
no_ID
HMMPanther	PTHR31561	FAMILY	1.2e-184	1-385
Seg	seg	seg	NA	4-16