Miyakogusa Predicted Gene
- Lj0g3v0239549.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MX81_SOYBN |
381 |
77.2 |
83.5 |
(tr|K7MX81) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G27325.2 |
149 |
39.5 |
52.5 |
| Symbols: | hydrolases, acting on ester bonds | chr3:10095956-10102087 FORWARD LENGTH=1121 |
| Medicago |
Medtr7g037280.2 |
353 |
74.3 |
80.2 |
| acting on ester bonds hydrolase | HC | chr7:13728799-13715500 | 20130731 |
| Soybean |
Glyma19g24220.1 |
381 |
77.2 |
83.5 |
|
| LJGI |
gnl|LJGI|TC71300 |
470 |
99.6 |
99.6 |
similar to UniRef100_A2Q4M6 Cluster: Esterase/lipase/thioesterase; Lipase, active site; n=1; Medicago truncatula|Rep: Esterase/lipase/thioesterase; Lipase, active site - Medicago truncatula (Barrel medic), partial (7%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0239549.1 |
length: 237 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR15495 |
NEGATIVE |
1.2e-23 |
10-219 |
| HMMPanther |
PTHR15495:SF7 |
SPHINGOSINE-1-PHOSPHATE |
1.2e-23 |
10-219 |
| Seg |
seg |
seg |
NA |
100-113 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
4 |
26 |
| 106 |
127 |
| 135 |
157 |
| 185 |
207 |
- Wolf-PSORT
Lj0g3v0239549.1 chlo 4, plas 4, E.R. 2, golg 2, chlo_mito 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0239549.1 |
|