| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7KRU7_MEDTR | 686 | 70.2 | 82.6 | (tr|G7KRU7) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g108530 PE=4 SV=1 |
| TAIR_pep | AT3G62890.1 | 299 | 38.0 | 56.6 | | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:23246168-23247973 FORWARD LENGTH=573 |
| Medicago | Medtr7g108530.1 | 686 | 70.2 | 82.6 | | PPR containing plant-like protein | HC | chr7:44212645-44210679 | 20130731 |
| Soybean | Glyma19g39670.1 | 610 | 69.3 | 78.7 | |
| LJGI | --No_Hits-- |
| Lj0g3v0239469.1 | length: 495 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF13041 | PPR_2 | 9.6e-10 | 202-248 302-349 |
| HMMPfam | PF13812 | PPR_3 | 0.34 | 99-130 377-402 445-473 |
| HMMTigr | TIGR00756 | PPR: | 3e-07 | 204-237 277-303 305-338 |
| ProfileScan | PS51375 | PPR | 7.509 | 97-134 202-236 170-201 237-271 303-337 272-302 375-409 338-372 441-475 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 0.00011 | 405-461 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 6.3e-154 | 45-489 |
| HMMPanther | PTHR24015:SF136SUBFAMILY | NOT | 6.3e-154 | 45-489 |
| Seg | seg | seg | NA | 80-92 |
Lj0g3v0239469.1 cyto 7, chlo 4, cyto_nucl 4, cyto_E.R. 4, cyto_plas 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0239469.1 |