Miyakogusa Predicted Gene

Lj0g3v0238769.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J5J3_MEDTR 414 96.1 99.0 (tr|G7J5J3) Spastin OS=Medicago truncatula GN=MTR_3g089100 PE=4 SV=1
TAIR_pep AT4G02480.1 390 92.2 95.1 | Symbols: | AAA-type ATPase family protein | chr4:1082082-1088680 REVERSE LENGTH=1265
Medicago Medtr3g089100.1 415 96.1 99.0 | P-loop nucleoside triphosphate hydrolase superfamily protein, putative | HC | chr3:33915623-33929519 | 20130731
Soybean Glyma04g37050.1 413 97.1 98.5  
LJGI gnl|LJGI|TC67445 250 81.0 81.0 similar to UniRef100_A7Q0A4 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0238769.1 length: 223 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 4.6e-19 18-155
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.3e-37 22-151
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 125-144
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-50 17-222
no_ID  
Gene3D G3DSA:1.10.8.60 no description 7.6e-16 162-216
Gene3D G3DSA:3.40.50.300 no description 1.6e-51 2-161
HMMPanther PTHR23074 AAA 3.9e-187 1-223
HMMPanther PTHR23074:SF20 AAA-FAMILY 3.9e-187 1-223
Seg seg seg NA 205-222
Wolf-PSORT
Lj0g3v0238769.1	chlo 5, cyto 5, nucl 2, pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0238769.1