| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7J375_MEDTR | 1211 | 68.8 | 76.6 | (tr|G7J375) Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein OS=Medicago truncatula GN=MTR_3g086770 PE=4 SV=1 |
| TAIR_pep | AT5G10370.1 | 961 | 53.5 | 67.1 | | Symbols: | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related | chr5:3261245-3267188 FORWARD LENGTH=1775 |
| Medicago | Medtr3g086770.1 | 1211 | 68.8 | 76.6 | | helicase, IBR and zinc finger protein | HC | chr3:39323283-39316838 | 20130731 |
| Soybean | Glyma11g37910.1 | 1144 | 65.5 | 74.5 | |
| LJGI | --No_Hits-- |
| Lj0g3v0238469.1 | length: 912 aa. | |||
| IPR001650 | Helicase, C-terminal | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00271 | Helicase_C | 4.9e-14 | 526-610 |
| HMMSmart | SM00490 | helicase | 5.8e-19 | 513-611 |
| ProfileScan | PS51194 | HELICASE_CTER | 16.370 | 485-651 |
| IPR002464 | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| PatternScan | PS00690 | DEAH_ATP_HELICASE | NA | 398-407 |
| IPR007502 | Helicase-associated domain | |||
| Molecular Function | GO:0004386 | helicase activity | ||
| HMMPfam | PF04408 | HA2 | 1.9e-14 | 672-767 |
| HMMSmart | SM00847 | Helicase | 9.7e-11 | 671-767 |
| IPR011709 | Domain of unknown function DUF1605 | |||
| HMMPfam | PF07717 | OB_NTP_bind | 5.6e-09 | 833-906 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
| HMMSmart | SM00487 | DEAD-like | 1.2e-24 | 280-465 |
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 15.746 | 292-456 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 8.2e-64 | 284-809 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 213-234 |
| Gene3D | G3DSA:3.40.50.300 | no description | 5.2e-16 | 282-440 487-628 |
| HMMPanther | PTHR18934 | ATP-DEPENDENT | 2.4e-226 | 174-909 |
| HMMPfam | PF13401 | AAA_22 | 5.8e-07 | 296-424 |
| Seg | seg | seg | NA | 172-185 270-284 410-423 473-487 803-816 |
Lj0g3v0238469.1 chlo 7, nucl 6
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0238469.1 |