Miyakogusa Predicted Gene

Lj0g3v0238219.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL M5VX25_PRUPE 263 41.4 50.5 (tr|M5VX25) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026419mg PE=4 SV=1

TAIR_pep AT5G03670.1 164 33.8 43.6 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). | chr5:947311-949898 FORWARD LENGTH=516

Medicago Medtr1g060890.1 280 43.1 51.9 | hypothetical protein | HC | chr1:26523784-26528833 | 20130731

Soybean Glyma03g34990.1 263 42.1 52.1

LJGI gnl|LJGI|BP077490 611 100.0 100.0 similar to UniRef100_A7PPI3 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0238219.1 length: 455 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 350-371

Seg seg seg NA 44-64
67-73
149-165
216-234
247-258
327-345

Wolf-PSORT

Lj0g3v0238219.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0238219.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	M5VX25_PRUPE	263	41.4	50.5	(tr\|M5VX25) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026419mg PE=4 SV=1
TAIR_pep	AT5G03670.1	164	33.8	43.6	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). \| chr5:947311-949898 FORWARD LENGTH=516
Medicago	Medtr1g060890.1	280	43.1	51.9	\| hypothetical protein \| HC \| chr1:26523784-26528833 \| 20130731
Soybean	Glyma03g34990.1	263	42.1	52.1
LJGI	gnl\|LJGI\|BP077490	611	100.0	100.0	similar to UniRef100_A7PPI3 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)

no_ID
Lj0g3v0238219.1				length: 455 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	350-371
Seg	seg	seg	NA	44-64 67-73 149-165 216-234 247-258 327-345