Miyakogusa Predicted Gene
- Lj0g3v0237959.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|TC73418 |
242 |
99.2 |
99.2 |
similar to UniRef100_O82520 Cluster: 3-oxoacyl-[acyl-carrier-protein] synthase; n=1; Capsicum chinense|Rep: 3-oxoacyl-[acyl-carrier-protein] synthase - Capsicum chinense (Scotch bonnet) (Bonnet pepper), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0237959.1 |
length: 60 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
37-51 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
16 |
| 33 |
55 |
- Wolf-PSORT
Lj0g3v0237959.1 extr 5, vacu 3, nucl 2, E.R._vacu 2, cyto 1, mito 1, plas 1, E.R. 1, cysk_nucl 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0237959.1 |
|