Miyakogusa Predicted Gene

Lj0g3v0237499.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M955_SOYBN 1417 81.0 85.3 (tr|I1M955) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G33210.1 1088 63.0 74.7 | Symbols: SLOMO | F-box family protein | chr4:16015971-16020697 REVERSE LENGTH=990
Medicago Medtr1g015450.1 1344 76.0 81.6 | F-box-like protein | HC | chr1:3862292-3870164 | 20130731
Soybean Glyma14g11260.1 1417 81.0 85.3  
LJGI gnl|LJGI|TC71688 1941 99.9 99.9 similar to UniRef100_A7P4T5 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0237499.1 length: 959 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 9.7e-07 163-203
ProfileScan PS50181 FBOX 9.656 157-203
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 64 334-359
360-385
407-432
516-541
544-574
586-611
649-674
675-700
723-748
776-816
895-919
920-952
no_ID  
Gene3D G3DSA:3.80.10.10 no description 2.5e-13 162-449
454-625
632-792
829-953
HMMPanther PTHR23125 F-BOX/LEUCINE 1.6e-208 145-943
HMMPanther PTHR23125:SF57 GB 1.6e-208 145-943
HMMPfam PF12937 F-box-like 3.1e-08 165-205
Seg seg seg NA 423-434
557-573
854-867
874-888
superfamily SSF52047 RNI-like 3.8e-19 180-450
507-787
735-952
Wolf-PSORT
Lj0g3v0237499.1	chlo 6.5, nucl 6, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0237499.1