Miyakogusa Predicted Gene

Lj0g3v0235829.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S0B5_LOTJA 277 74.2 75.3 (tr|I3S0B5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G34460.1 214 61.1 67.2 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein beta 1 | chr4:16477393-16479266 REVERSE LENGTH=377
Medicago Medtr3g116500.2 253 68.8 73.4 | guanine nucleotide-binding protein beta subunit-like protein | HC | chr3:54501019-54496204 | 20130731
Soybean Glyma11g12600.1 254 68.5 72.6  
LJGI gnl|LJGI|TC59674 771 100.0 100.0 homologue to UniRef100_Q9SW94 Cluster: G protein beta subunit; n=1; Pisum sativum|Rep: G protein beta subunit - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0235829.1 length: 198 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 2.4e-11 1-15
23-58
HMMSmart SM00320 WD40 0.012 19-58
61-105
ProfileScan PS50082 WD_REPEATS_2 13.917 1-24
26-67
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.2e-29 2-129
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 22.517 1-114
superfamily SSF50978 WD40 3.7e-26 1-136
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 92-106
no_ID  
HMMPanther PTHR19850 GUANINE 1.9e-72 1-130
HMMPanther PTHR19850:SF3 GUANINE 1.9e-72 1-130
Wolf-PSORT
Lj0g3v0235829.1	cyto 4, golg 4, nucl 3, chlo 1, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0235829.1