Miyakogusa Predicted Gene

Lj0g3v0235399.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7K8V7_SOYBN 3651 84.7 90.4 (tr|K7K8V7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G77460.2 2754 64.8 78.4 | Symbols: | Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein | chr1:29104378-29111580 FORWARD LENGTH=2136
Medicago Medtr1g029790.1 3572 83.8 89.3 | armadillo/beta-catenin-like repeat protein | HC | chr1:10323565-10313898 | 20130731
Soybean Glyma02g26450.1 3600 84.7 90.5  
LJGI gnl|LJGI|TC68010 841 100.0 100.0 similar to UniRef100_A7NVF7 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0235399.2 length: 2135 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00168 C2 2.6e-11 2009-2088
HMMSmart SM00239 Protein 5.4e-11 2008-2104
IPR000225 Armadillo
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 7.8e-07 505-541
HMMSmart SM00185 Armadillo/beta-catenin-like 1.7e+02 69-110
111-151
156-200
201-242
244-285
287-336
502-542
544-584
623-663
710-750
751-791
1015-1064
1206-1246
1288-1329
1375-1415
1416-1456
1543-1584
1708-1746
1747-1790
1834-1874
ProfileScan PS50176 ARM_REPEAT 10.937 255-299
513-555
IPR008973 C2 calcium/lipid-binding domain, CaLB
Molecular Function GO:0005515 protein binding    
superfamily SSF49562 C2 9.3e-18 2002-2129
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 2.5e-20 6-152
158-334
387-586
825-878
1172-1286
1721-1774
1775-2005
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2e-06 67-312
1557-2005
1171-1542
373-618
631-961
910-1133
IPR018029 C2 membrane targeting protein
ProfileScan PS50004 C2 8.828 2009-2089
no_ID  
Gene3D G3DSA:2.60.40.150 no description 4.1e-14 2007-2124
HMMPanther PTHR23315 BETA 0 994-2135
HMMPanther PTHR23315:SF7 ANKYRIN-REPEAT-ARM 0 994-2135
Seg seg seg NA 136-145
271-287
737-749
818-829
1211-1222
1346-1368
1676-1686
Wolf-PSORT
Lj0g3v0235399.2	plas 8, E.R. 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0235399.2