Miyakogusa Predicted Gene

Lj0g3v0234889.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KK36_MEDTR 442 86.5 93.7 (tr|G7KK36) Membrane protein, putative OS=Medicago truncatula GN=MTR_4g132570 PE=4 SV=1
TAIR_pep AT1G11960.1 395 74.3 90.3 | Symbols: | ERD (early-responsive to dehydration stress) family protein | chr1:4039871-4043143 REVERSE LENGTH=771
Medicago Medtr4g132570.2 442 86.5 93.7 | ERD (early-responsive to dehydration stress) family protein | HC | chr4:55428053-55422340 | 20130731
Soybean Glyma07g39320.1 442 88.2 94.1  
LJGI gnl|LJGI|AV780051 805 96.6 96.6 similar to UniRef100_UPI0000162D32 Cluster: early-responsive to dehydration protein-related / ERD protein-related; n=1; Arabidopsis thaliana|Rep: early-responsive to dehydration protein-related / ERD protein-related - Arabidopsis thaliana, partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0234889.1 length: 281 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR13018 PROBABLE 2.4e-79 2-223
HMMPanther PTHR13018:SF5 RSN1(YEAST)-RELATED 2.4e-79 2-223
HMMPfam PF13967 RSN1_TM 1.6e-43 8-179
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
61 83
98 120
159 181
Wolf-PSORT
Lj0g3v0234889.1	chlo 6, plas 3, E.R. 3, chlo_mito 3, E.R._plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0234889.1