Miyakogusa Predicted Gene
- Lj0g3v0234859.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|TC57821 |
52.0 |
94.1 |
94.1 |
similar to UniRef100_A9PLA4 Cluster: RAP2-like protein; n=1; Populus trichocarpa|Rep: RAP2-like protein - Populus trichocarpa (Western balsam poplar) (Populus balsamiferasubsp. trichocarpa), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0234859.1 |
length: 138 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
52-65 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
40 |
62 |
| 74 |
96 |
| 120 |
137 |
- Wolf-PSORT
Lj0g3v0234859.1 chlo 6, mito 3, nucl 2, cyto 2, cyto_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0234859.1 |
|