Miyakogusa Predicted Gene
- Lj0g3v0234849.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LI75_MEDTR |
121 |
57.3 |
70.9 |
(tr|G7LI75) Disease resistance protein OS=Medicago truncatula GN=MTR_8g018170 PE=4 SV=1 |
| TAIR_pep |
AT4G11170.1 |
80.1 |
42.0 |
61.6 |
| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr4:6811127-6817130 FORWARD LENGTH=1095 |
| Medicago |
Medtr8g018170.1 |
121 |
57.3 |
70.9 |
| disease resistance protein (TIR-NBS-LRR class), putative | LC | chr8:6146125-6135140 | 20130731 |
| Soybean |
Glyma10g32800.1 |
105 |
57.8 |
68.6 |
|
| LJGI |
gnl|LJGI|DC593322 |
121 |
84.7 |
84.7 |
similar to UniRef100_A7QGH9 Cluster: Chromosome undetermined scaffold_92, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_92, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0234849.1 |
length: 107 aa. |
| IPR002182 |
NB-ARC |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0043531 |
ADP binding |
|
|
| HMMPfam |
PF00931 |
NB-ARC |
1.8e-16 |
1-107 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
1.3e-09 |
1-107 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
5.5e-05 |
3-83 |
| HMMPanther |
PTHR23155 |
LEUCINE-RICH |
9.3e-21 |
1-107 |
| HMMPanther |
PTHR23155:SF93 |
SUBFAMILY |
9.3e-21 |
1-107 |
- Wolf-PSORT
Lj0g3v0234849.1 cyto 7, mito 2, chlo 1, nucl 1, extr 1, E.R. 1, pero 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0234849.1 |
|