Miyakogusa Predicted Gene
- Lj0g3v0234699.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IKD2_MEDTR |
121 |
39.3 |
55.7 |
(tr|G7IKD2) F-box/kelch-repeat protein OS=Medicago truncatula GN=MTR_2g021190 PE=4 SV=1 |
| TAIR_pep |
AT4G12560.2 |
52.8 |
27.3 |
54.5 |
| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413 |
| Medicago |
Medtr3g006640.1 |
128 |
41.1 |
57.5 |
| F-box protein interaction domain protein | LC | chr3:793555-792668 | 20130731 |
| Soybean |
Glyma15g10860.1 |
120 |
39.1 |
56.4 |
|
| LJGI |
gnl|LJGI|TC60928 |
1189 |
100.0 |
100.0 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0234699.1 |
length: 199 aa. |
| IPR006527 |
F-box associated domain, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07734 |
FBA_1 |
1.1e-07 |
42-135 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
2.8e-18 |
10-146 |
- Wolf-PSORT
Lj0g3v0234699.1 cyto 8, extr 2, cysk 2, chlo 1, nucl 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0234699.1 |
|