Miyakogusa Predicted Gene
- Lj0g3v0234009.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L7P0_SOYBN |
719 |
68.0 |
80.4 |
(tr|K7L7P0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G13570.1 |
71.6 |
30.8 |
45.7 |
| Symbols: | F-box/RNI-like superfamily protein | chr1:4642528-4643930 REVERSE LENGTH=416 |
| Medicago |
Medtr8g015830.1 |
701 |
68.5 |
78.5 |
| F-box/FBD-like domain protein, putative | HC | chr8:5202774-5207538 | 20130731 |
| Soybean |
Glyma08g20850.1 |
579 |
57.7 |
71.0 |
|
| LJGI |
gnl|LJGI|TC58303 |
1362 |
99.4 |
99.4 |
similar to UniRef100_A2Q6A7 Cluster: Cyclin-like F-box; n=1; Medicago truncatula|Rep: Cyclin-like F-box - Medicago truncatula (Barrel medic), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0234009.1 |
length: 533 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| superfamily |
SSF81383 |
F-box |
6.7e-08 |
4-42 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
2.8e-17 |
376-377 |
| superfamily |
SSF52047 |
RNI-like |
1.4e-11 |
41-498 |
- Wolf-PSORT
Lj0g3v0234009.1 nucl 10, cyto 2, chlo 1, golg 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0234009.1 |
|