| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LIT2_SOYBN | 245 | 46.7 | 61.6 | (tr|K7LIT2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G33270.1 | 110 | 31.5 | 51.5 | | Symbols: CDC20.1 | Transducin family protein / WD-40 repeat family protein | chr4:16044545-16046590 REVERSE LENGTH=457 |
| Medicago | Medtr2g060710.1 | 228 | 44.2 | 59.5 | | transducin/WD40 repeat protein | HC | chr2:25747612-25744900 | 20130731 |
| Soybean | Glyma02g09620.1 | 174 | 54.9 | 69.4 | |
| LJGI | gnl|LJGI|TC59011 | 252 | 87.6 | 87.6 | similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%) |
| Lj0g3v0232589.1 | length: 272 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00400 | WD40 | 0.00084 | 213-245 |
| HMMSmart | SM00320 | WD40 | 0.0071 | 125-165 206-245 |
| ProfileScan | PS50082 | WD_REPEATS_2 | 12.012 | 141-174 213-246 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:2.130.10.10 | no description | 1.4e-19 | 107-246 |
| IPR017986 | WD40-repeat-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 12.684 | 133-254 |
| superfamily | SSF50978 | WD40 | 5.7e-22 | 84-246 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 152-166 232-246 |
| no_ID | ||||
| HMMPanther | PTHR19918 | CELL | 8.9e-36 | 172-272 |
| HMMPanther | PTHR19918:SF0 | SUBFAMILY | 8.9e-36 | 172-272 |
Lj0g3v0232589.1 nucl 8, nucl_plas 5.5, cyto 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0232589.1 |