Miyakogusa Predicted Gene

Lj0g3v0231399.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T1P2_LOTJA 251 72.8 74.4 (tr|I3T1P2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G67740.1 106 42.1 51.8 | Symbols: PSBY, YCF32 | photosystem II BY | chr1:25394429-25394998 REVERSE LENGTH=189
Medicago Medtr3g086230.1 170 54.4 62.1 | photosystem II core complex family psbY protein | HC | chr3:39017750-39016812 | 20130731
Soybean Glyma11g37580.1 202 60.3 64.8  
LJGI gnl|LJGI|TC67615 1219 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0231399.1 length: 204 aa.
IPR009388 Photosystem II PsbY
method AccNumber shortName E-value location
Cellular Component GO:0009523 photosystem II    
Biological Process GO:0015979 photosynthesis    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0030145 manganese ion binding    
HAMAP MF_00717 PSII_PsbY 10.922 91-125
HMMPfam PF06298 PsbY 1.3e-05 91-123
179-201
no_ID  
Seg seg seg NA 1-11
77-89
95-106
132-143
Putative transmembrane regions
  From To
TM segments
SOSUI		 57 79
94 116
125 147
174 196
Wolf-PSORT
Lj0g3v0231399.1	vacu 7, chlo 3, extr 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0231399.1