Miyakogusa Predicted Gene

Lj0g3v0230449.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SSW9_MEDTR 677 67.5 77.4 (tr|I3SSW9) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT4G20310.2 330 38.8 52.6 | Symbols: | Peptidase M50 family protein | chr4:10961639-10963690 FORWARD LENGTH=488
Medicago Medtr8g070630.1 680 67.7 77.6 | membrane-bound transcription factor site 2 protease | HC | chr8:29895489-29902343 | 20130731
Soybean Glyma16g20030.1 310 75.5 83.5  
LJGI gnl|LJGI|FS322595 908 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0230449.1 length: 537 aa.
IPR001193 Sterol-regulatory element binding proteins intramembrane protease
method AccNumber shortName E-value location
Molecular Function GO:0004222 metalloendopeptidase activity    
Biological Process GO:0006508 proteolysis    
Cellular Component GO:0016020 membrane    
FPrintScan PR01000 SREBPS2PTASE 6.3e-06 140-154
156-171
HMMPanther PTHR13325 PROTEASE 2.5e-75 35-530
IPR008915 Peptidase M50
Molecular Function GO:0004222 metalloendopeptidase activity    
Biological Process GO:0006508 proteolysis    
HMMPfam PF02163 Peptidase_M50 4.1e-18 133-532
no_ID  
Gene3D G3DSA:2.30.42.10 no description 0.00028 226-263
HMMPanther PTHR13325:SF0 SUBFAMILY 2.5e-75 35-530
Seg seg seg NA 6-16
201-221
511-526
Putative transmembrane regions
  From To
TM segments
SOSUI		 70 92
114 136
156 178
200 222
462 484
516 536
Wolf-PSORT
Lj0g3v0230449.1	plas 10, nucl 1, mito 1, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0230449.1