Miyakogusa Predicted Gene
- Lj0g3v0229569.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N4V5_SOYBN |
99.0 |
58.5 |
72.0 |
(tr|K7N4V5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G14440.2 |
89.0 |
75.5 |
91.8 |
| Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 | chr1:4939076-4940014 REVERSE LENGTH=312 |
| Medicago |
Medtr1g077020.1 |
89.7 |
74.5 |
86.3 |
| homeobox domain, ZF-HD class protein | HC | chr1:34371555-34370690 | 20130731 |
| Soybean |
Glyma20g35690.1 |
98.6 |
59.3 |
71.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0229569.1 |
length: 122 aa. |
| IPR006456 |
ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
| method |
AccNumber |
shortName |
E-value |
location |
| BlastProDom |
PD125774 |
Q9M9S0_ARATH_Q9M9S0; |
5e-16 |
30-74 |
| HMMPfam |
PF04770 |
ZF-HD_dimer |
7.5e-22 |
30-74 |
| HMMTigr |
TIGR01566 |
ZF_HD_prot_N: |
2.3e-21 |
32-74 |
| ProfileScan |
PS51523 |
ZF_HD_DIMER |
22.603 |
32-81 |
| no_ID |
|
| HMMPanther |
PTHR31948 |
FAMILY |
5.1e-22 |
28-74 |
| HMMPanther |
PTHR31948:SF0 |
SUBFAMILY |
5.1e-22 |
28-74 |
| Seg |
seg |
seg |
NA |
74-82 |
- Wolf-PSORT
Lj0g3v0229569.1 cyto 10, nucl 1, extr 1, cysk 1, golg 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0229569.1 |
|