Miyakogusa Predicted Gene

Lj0g3v0228419.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LU44_SOYBN 268 79.7 90.5 (tr|I1LU44) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G05120.1 251 72.8 86.1 | Symbols: | Helicase protein with RING/U-box domain | chr1:1471624-1476067 REVERSE LENGTH=833
Medicago Medtr4g049500.1 262 77.8 89.9 | RING/U-box helicase | HC | chr4:17406992-17415500 | 20130731
Soybean Glyma13g38580.1 268 79.7 90.5  
LJGI gnl|LJGI|TC79927 664 99.7 99.7 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0228419.1 length: 160 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 4.2e-11 27-104
HMMSmart SM00490 helicase 4.5e-15 21-104
ProfileScan PS51194 HELICASE_CTER 13.377 1-150
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.2e-46 1-160
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.3e-12 7-133
HMMPanther PTHR10799 SWI/SNF-RELATED 1e-86 1-158
HMMPanther PTHR10799:SF62 DNA 1e-86 1-158
Wolf-PSORT
Lj0g3v0228419.1	vacu 5, chlo 3, nucl 2, extr 2, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0228419.1