Miyakogusa Predicted Gene

Lj0g3v0227659.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 230 46.6 62.2 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 189 37.4 54.2 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 220 44.2 60.5 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 157 38.7 53.9  
LJGI gnl|LJGI|FS330439 254 90.7 90.7 weakly similar to UniRef100_A7PSR1 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0227659.1 length: 285 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.079 10-33
HMMPfam PF12854 PPR_1 4.4e-06 135-164
HMMPfam PF13041 PPR_2 1.6e-09 43-90
HMMTigr TIGR00756 PPR: 0.00014 12-36
46-80
142-165
ProfileScan PS51375 PPR 6.577 1-35
44-78
79-109
138-172
173-207
260-285
no_ID  
HMMPanther PTHR24015 FAMILY 2e-32 2-284
HMMPanther PTHR24015:SF0 SUBFAMILY 2e-32 2-284
Wolf-PSORT
Lj0g3v0227659.1	cyto 9, nucl 3, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0227659.1