Miyakogusa Predicted Gene
- Lj0g3v0225949.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SVQ2_LOTJA |
571 |
94.8 |
95.2 |
(tr|I3SVQ2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G15050.1 |
246 |
57.2 |
73.6 |
| Symbols: IQD10 | IQ-domain 10 | chr3:5066879-5067892 REVERSE LENGTH=259 |
| Medicago |
Medtr2g078210.1 |
428 |
70.8 |
78.5 |
| calmodulin-binding protein | HC | chr2:32513502-32509624 | 20130731 |
| Soybean |
Glyma13g34700.1 |
448 |
76.7 |
84.3 |
|
| LJGI |
gnl|LJGI|TC63111 |
1725 |
100.0 |
100.0 |
similar to UniRef100_A7QPM3 Cluster: Chromosome chr10 scaffold_138, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_138, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0225949.1 |
length: 289 aa. |
| IPR000048 |
IQ motif, EF-hand binding site |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| ProfileScan |
PS50096 |
IQ |
8.480 |
72-97 |
| no_ID |
|
| HMMPanther |
PTHR32295 |
FAMILY |
3.7e-53 |
63-237 |
| HMMPanther |
PTHR32295:SF0 |
SUBFAMILY |
3.7e-53 |
63-237 |
| Seg |
seg |
seg |
NA |
14-27 |
- Wolf-PSORT
Lj0g3v0225949.1 nucl 7.5, cyto_nucl 6, cyto 3.5, chlo 1, mito 1, chlo_mito 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0225949.1 |
|