Miyakogusa Predicted Gene
- Lj0g3v0225689.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1J442_SOYBN |
159 |
81.1 |
88.9 |
(tr|I1J442) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G38840.1 |
112 |
55.6 |
73.7 |
| Symbols: | SAUR-like auxin-responsive protein family | chr4:18125174-18125473 REVERSE LENGTH=99 |
| Medicago |
Medtr3g084150.1 |
150 |
75.6 |
87.8 |
| SAUR-like auxin-responsive family protein | HC | chr3:38025324-38024255 | 20130731 |
| Soybean |
Glyma0079s00250.1 |
159 |
81.1 |
88.9 |
|
| LJGI |
gnl|LJGI|TC69658 |
119 |
83.3 |
83.3 |
similar to UniRef100_P33080 Cluster: Auxin-induced protein X10A; n=1; Glycine max|Rep: Auxin-induced protein X10A - Glycine max (Soybean), partial (80%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0225689.1 |
length: 91 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
1.1e-29 |
12-89 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
3.9e-28 |
1-90 |
- Wolf-PSORT
Lj0g3v0225689.1 nucl 4.5, mito 4, cyto_nucl 4, chlo 3, cyto 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0225689.1 |
|