Miyakogusa Predicted Gene
- Lj0g3v0223599.4
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N541_SOYBN |
814 |
71.8 |
82.9 |
(tr|K7N541) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT3G04380.1 |
501 |
69.4 |
84.5 |
| Symbols: SUVR4, SDG31 | SET-domain containing protein lysine methyltransferase family protein | chr3:1161602-1164539 FORWARD LENGTH=492 |
| Medicago |
Medtr1g080340.1 |
633 |
62.4 |
70.1 |
| histone-lysine N-methyltransferase SUVR2-like protein | HC | chr1:35689448-35684383 | 20130731 |
| Soybean |
Glyma10g30830.1 |
813 |
70.7 |
83.1 |
|
| LJGI |
gnl|LJGI|AV774472 |
547 |
94.4 |
94.4 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0223599.4 |
length: 570 aa. |
| IPR001214 |
SET domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00856 |
SET |
4.1e-20 |
404-526 |
| HMMSmart |
SM00317 |
SET |
2.5e-36 |
392-532 |
| ProfileScan |
PS50280 |
SET |
28.797 |
391-530 |
| IPR003606 |
Pre-SET zinc-binding sub-group |
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Molecular Function |
GO:0018024 |
histone-lysine N-methyltransferase activity |
|
|
| Biological Process |
GO:0034968 |
histone lysine methylation |
|
|
| HMMSmart |
SM00468 |
N-terminal |
2.5e-09 |
234-376 |
| IPR007728 |
Pre-SET domain |
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Molecular Function |
GO:0018024 |
histone-lysine N-methyltransferase activity |
|
|
| Biological Process |
GO:0034968 |
histone lysine methylation |
|
|
| HMMPfam |
PF05033 |
Pre-SET |
1.3e-19 |
236-384 |
| ProfileScan |
PS50867 |
PRE_SET |
8.861 |
286-389 |
| IPR025776 |
Histone-lysine N-methyltransferase SUVR1/2/4 |
| ProfileScan |
PS51580 |
SAM_MT43_3 |
182.724 |
73-564 |
| no_ID |
|
| Gene3D |
G3DSA:2.170.270.10 |
no description |
2e-70 |
361-550 |
| HMMPanther |
PTHR22884 |
SET |
3.2e-138 |
231-555 |
| HMMPanther |
PTHR22884:SF23 |
SET |
3.2e-138 |
231-555 |
| Seg |
seg |
seg |
NA |
551-565 |
| superfamily |
SSF82199 |
SET |
5.9e-84 |
243-550 |
- Wolf-PSORT
Lj0g3v0223599.4 nucl 8, cyto 2, cysk 2, chlo 1, vacu 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0223599.4 |
|