Miyakogusa Predicted Gene

Lj0g3v0223409.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MIV1_SOYBN 720 52.7 69.1 (tr|K7MIV1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G17680.1 384 38.7 57.4 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr5g038180.1 692 61.2 74.5 | disease resistance protein | LC | chr5:16688804-16694793 | 20130731
Soybean Glyma16g33680.1 720 52.4 69.0  
LJGI gnl|LJGI|TC74915 438 86.1 86.1 weakly similar to UniRef100_Q8W2C0 Cluster: Functional candidate resistance protein KR1; n=1; Glycine max|Rep: Functional candidate resistance protein KR1 - Glycine max (Soybean), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0223409.1 length: 917 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 3.4e-35 14-147
HMMSmart SM00255 Toll 2.8e-36 11-151
ProfileScan PS50104 TIR 28.469 10-151
superfamily SSF52200 Toll/Interleukin 2.3e-41 1-154
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1e-21 212-227
288-302
381-395
553-569
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 1.6e-43 194-451
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 0.00015 209-345
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.2e-29 171-418
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 5.1e-22 9-145
Gene3D G3DSA:3.40.50.300 no description 0.00034 210-352
595-650
HMMPanther PTHR11017 LEUCINE-RICH 1e-179 1-601
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1e-179 1-601
Seg seg seg NA 5-22
344-356
758-769
808-820
858-869
superfamily SSF46785 "Winged 6.6e-28 416-524
superfamily SSF52058 L 3.7e-06 498-601
Putative transmembrane regions
  From To
TM segments
SOSUI		 719 740
755 777
787 809
818 839
847 869
882 904
Wolf-PSORT
Lj0g3v0223409.1	cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0223409.1